Protein ZmOrphan270
ZmOrphan270 is a protein in the Orphans family.
Information
Orphans Name: ZmOrphan270
Species: Maize
Orphans Family: Orphans
Gene Name(Synonym):
Uniprot ID: B6SQD3
Subgenome: 2

Protein ZmOrphan270

ZmOrphan270 is a protein in the Orphans family.

Overview of domains present in v5 transcripts
PF06203
Zm00001eb345540_T002
Zm00001eb345540_T001

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs


Gene IDTypeMEME LogoSequenceFIMOPosition
Zm00001d009773DAPseq no logo sequence fimo position
Zm00001d009773DAPseq no logo sequence fimo position
Zm00001d009773ChIPseq no logo sequence fimo position
Zm00001d009773PChIPseq no logo sequence fimo position

Interactions where ZmOrphan270 is the regulator


There are no protein-dna interactions that fit this criteria.

Interactions where ZmOrphan270 is the target  
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There are 146 protein-dna interactions that fit this criteria. download excel sheet

Zm00001eb345540_T002 from maize genome v5

Amino Acid Sequence
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MYADAGFAFAFAAAYSPTLTSSQPQPPPPPFDYAFSSEPPLLSMPAMDHDAYLGNLVQPSMVSEYDLGGEGDLFKAPEAI
IEEPLLSLDPVAAAFSMMAGNGSAVMDQTIKDAGIGTIQNDPLLSEVLYECEKELMEKSTIEETISELMDVKIPMLQVEE
IPSQAEQVLIQNQQLPAMEKEKQSVPECSLQKSVSSGCLNSADWMNGPARPNFLDFQGLDFEAAFGLRRAYSEGDIQNLG
ANTPRPAANVCVTISDLKTEERKQKLSRYRKKKIKRNFGRKIKYACRKALADSQPRVRGRFAKIEECDLLKPSK

MYADAGFAFAFAAAYSPTLTSSQPQPPPPPFDYAFSSEPPLLSMPAMDHDAYLGNLVQPSMVSEYDLGGEGDLFKAPEAI
IEEPLLSLDPVAAAFSMMAGNGSAVMDQTIKDAGIGTIQNDPLLSEVLYECEKELMEKSTIEETISELMDVKIPMLQVEE
IPSQAEQVLIQNQQLPAMEKEKQSVPECSLQKSVSSGCLNSADWMNGPARPNFLDFQGLDFEAAFGLRRAYSEGDIQNLG
ANTPRPAANVCVTISDLKTEERKQKLSRYRKKKIKRNFGRKIKYACRKALADSQPRVRGRFAKIEECDLLKPSK

MYADAGFAFAFAAAYSPTLTSSQPQPPPPPFDYAFSSEPPLLSMPAMDHDAYLGNLVQPSMVSEYDLGGEGDLFKAPEAI
IEEPLLSLDPVAAAFSMMAGNGSAVMDQTIKDAGIGTIQNDPLLSEVLYECEKELMEKSTIEETISELMDVKIPMLQVEE
IPSQAEQVLIQNQQLPAMEKEKQSVPECSLQKSVSSGCLNSADWMNGPARPNFLDFQGLDFEAAFGLRRAYSEGDIQNLG
ANTPRPAANVCVTISDLKTEERKQKLSRYRKKKIKRNFGRKIKYACRKALADSQPRVRGRFAKIEECDLLKPSK

MYADAGFAFAFAAAYSPTLTSSQPQPPPPPFDYAFSSEPPLLSMPAMDHDAYLGNLVQPSMVSEYDLGGEGDLFKAPEAI
IEEPLLSLDPVAAAFSMMAGNGSAVMDQTIKDAGIGTIQNDPLLSEVLYECEKELMEKSTIEETISELMDVKIPMLQVEE
IPSQAEQVLIQNQQLPAMEKEKQSVPECSLQKSVSSGCLNSADWMNGPARPNFLDFQGLDFEAAFGLRRAYSEGDIQNLG
ANTPRPAANVCVTISDLKTEERKQKLSRYRKKKIKRNFGRKIKYACRKALADSQPRVRGRFAKIEECDLLKPSK

MYADAGFAFAFAAAYSPTLTSSQPQPPPPPFDYAFSSEPPLLSMPAMDHDAYLGNLVQPSMVSEYDLGGEGDLFKAPEAI
IEEPLLSLDPVAAAFSMMAGNGSAVMDQTIKDAGIGTIQNDPLLSEVLYECEKELMEKSTIEETISELMDVKIPMLQVEE
IPSQAEQVLIQNQQLPAMEKEKQSVPECSLQKSVSSGCLNSADWMNGPARPNFLDFQGLDFEAAFGLRRAYSEGDIQNLG
ANTPRPAANVCVTISDLKTEERKQKLSRYRKKKIKRNFGRKIKYACRKALADSQPRVRGRFAKIEECDLLKPSK

Secondary Structure Color Code
BEND region with high backbone curvature without specific hydrogen bonding
HELX_LH_PP_P left-handed polyproline helix
HELX_RH_3T_P right-handed 3-10 helix
HELX_RH_AL_P right-handed alpha helix
HELX_RH_PI_P right-handed pi helix
STRN beta strand
TURN_TY1_P type I turn
UNDETERMINED no data available
Domains Present
PF06203
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Nucleotide Sequence
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TCCTCCTGCGGCCGTCCTGCTCCTG...

GRMZM2G126026_T01 from maize genome v3

Amino Acid Sequence
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MYADAGFAFAFAAAYSPTLTSSQPQPPPPPFDYAFSSEPPLLSMPAMDHDAYLNLGANTPRPAANVCVTISDLKTEERKQ
KLSRYRKKKIKRNFGRKIKYACRKALADSQPRVRGRFAKIEECDLLKPSK

Nucleotide Sequence
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TCCTCCTGCGGCCGTCCTGCTCCTG...

GRMZM2G126026_T02 from maize genome v3


Related TFome: pUT6281

Amino Acid Sequence
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MYADAGFAFAFAAAYSPTLTSSQPQPPPPPFDYAFSSEPPLLSMPAMDHDAYLGNLVQPSMVSEYDLGGEGDLFKAPEAI
IEEPLLSLDPVAAAFSMMAGNGSAVMDQTIKDAGIGTIQNDPLLSEVLYECEKELMEKSTIEETISELMDVKIPMLQVEE
IPSQAEQVLIQNQQLPAMEKEKQSVPECSLQKSVSSGCLNSADWMNGPARPNFLDFQGLDFEAAFGLRRAYSERRHSEPW
SQHASTSSKCLCDHQ

Nucleotide Sequence
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ACTCTTCCGATCCCGACGAGGTAAA...

Zm00001d009773_T001 from maize genome v4

Amino Acid Sequence
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MYADAGFAFAFAAAYSPTLTSSQPQPPPPPFDYAFSSEPPLLSMPAMDHDAYLGNLVQPSMVSEYDLGGEGDLFKAPEAI
IEEPLLSLDPVAAAFSMMAGNGSAVMDQTIKDAGIGTIQNDPLLSEVLYECEKELMEKSTIEETISELMDVKIPMLQVEE
IPSQAEQVLIQNQQLPAMEKEKQSVPECSLQKSVSSGCLNSADWMNGPARPNFLDFQGLDFEAAFGLRRAYSEGDIQNLG
ANTPRPAANVCVTISDLKTEERKQKLSRYRKKKIKRNFGRKIKYACRKALADSQPRVRGRFAKIEECDLLKPSK

Nucleotide Sequence
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ACGGCCCACTCGGGCTCTTCACTCT...

Zm00001d009773_T002 from maize genome v4

Amino Acid Sequence
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MYADAGFAFAFAAAYSPTLTSSQPQPPPPPFDYAFSSEPPLLSMPAMDHDAYLGNLVQPSMVSEYDLGGEGDLFKAPEAI
IEEPLLSLDPVAAAFSMMAGNGSAVMDQTIKDAGIGTIQNDPLLSEVLYECEKELMEKSTIEETISELMDVKIPMLQVEE
IPSQAEQVLIQNQQLPAMEKEKQSVPECSLQKSVSSGCLNSADWMNGPARPNFLDFQGLDFEAAFGLRRAYSEGDIQNLG
ANTPRPAANVCVTISDLKTEERKQKLSRYRKYACRKALADSQPRVRGRFAKIEECDLLKPSK

Nucleotide Sequence
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ACTCTTCCGATCCCGACGAGGTAAA...

Zm00001d009773_T003 from maize genome v4

Amino Acid Sequence
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MDQTIKDAGIGTIQNDPLLSEVLYECEKELMEKSTIEETISELMDVKIPMLQVEQLPAMEKEKQSVPECSLQKSVSSGCL
NSADWMNGPARPNFLDFQGLDFEAAFGLRRAYSEGDIQNLGANTPRPAANVCVTISDLKTEERKQKLSRYRKKKIKRNFG
RKIKYACRKALADSQPRVRGRFAKIEECDLLKPSK

Nucleotide Sequence
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TGCTGTCATGGATCAAACTATTAAG...

Zm00001eb345540_T001 from maize genome v5

Amino Acid Sequence
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MYADAGFAFAFAAAYSPTLTSSQPQPPPPPFDYAFSSEPPLLSMPAMDHDAYLGNLVQPSMVSEYDLGGEGDLFKAPEAI
IEEPLLSLDPVAAAFSMMAGNGSAVMDQTIKDAGIGTIQNDPLLSEVLYECEKELMEKSTIEETISELMDVKIPMLQVEE
IPSQAEQVLIQNQQLPAMEKEKQSVPECSLQKSVSSGCLNSADWMNGPARPNFLDFQGLDFEAAFGLRRAYSEGDIQNLG
ANTPRPAANVCVTISDLKTEERKQKLSRYRKKKIKRNFGRKIKYACRKALADSQPRVRGRFAKIEECDLLKPSK

Nucleotide Sequence
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TCCTCCTGCGGCCGTCCTGCTCCTG...


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